Publication overview
Learning Bayesian network parameters under order constraints
Feelders, A.Van de Gaag, L. C.Intern J of Approximate Reasoning 2006, 42(1): 37
Complexity of bio-computation: symbolic dynamics in membrane systems
Muskulus, M.Brijder, R.Int J of foundations of computer science 2006
Approximate power and sample size calculations with the Benjamini-Hocheberg method
Ferreira, J. A.Zwinderman, A. H.Int J of Biostatistics 2006, 2(1)
Integrins of Anopheles gambiae and a putative role of a new beta integrin, BINT2, in phagocytosis of E. coli
Moita, L. F.Vriend, G.Mahairaki, V.Louis, C.Kafatos, F. C.Insect Biochem Mol Biol 2006, 36(4): 282
Heterogenous information Systems: bridging the gap of time and space. Management and retrieval of spatio-temporal gene Expression data
Belmamoune, M.verbeek, F. J.InSCit2006 2006, 1: 53
Improving a local learning technique for queue wait time predictions
Li, H.Chen, J.Tao, Y.Groep, D.Wolters, L.in proceedings of the 6th IEEE International Symposium on Cluster Computing and the Grid (CCGrid2006) 2006: 335
Experiental sampling in multimedia systems
Kankanhalli, M. S.Wang, J.Jain, R.IEEE transactions on multimedis 2006, 8: 937
Prorenin induces intracellular signaling in cardiomyocytes independently of angiotensin II
Saris, J. J.Hoen, P. A.Garrelds, I. M.Dekkers, D. H.den Dunnen, J. T.Lamers, J. M.Jan...Hypertension 2006, 48(4): 564
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Human-Centered Aspects
Kulyk, O.Kosara, R.Urquiza, J.Wassink, I.Kerren, E.Ebert, A.Meyer, J.Human-Centered Visualization Environments 2006, 4417: 13
Interacting with visualisations
Bierz, T.Fikkert, W.Jankun-Kelly, T. J.D'Ambros, M.Kerren, E.Ebert, A.Meyer, J.Human-centered visualisation environments 2006
Estimating haplotype effects on dichotomous outcome for unphased genotype data using a weighted penalized log-likelihood approach
Souverein, O. W.Zwinderman, A. H.Tanck, M. W.Hum Hered 2006, 61(2): 104
Bioinformatics methods for identifying candidate disease genes
van Driel, M. A.Brunner, H. G.Hum Genomics 2006, 2(6): 429
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Comparison of 3D organization of ventricular fibrillation in hearts of different animals and the human heart
Ten Tusscher, K. H. W. J.Panfilov, A. V.Heart Rhythm 2006: 261
Conditions for spiral breakup in the human ventricles
Panfilov, A. V.Hren, R.ten Tusscher, K. H.Keldermann, R. H.Heart Rhythm 2006: 186
The biological carbon pump revisited: feedback mechanisms between climated and the refield ratio
Dijkstra, H. A.Bruggeman, J.Omta, A. W.Kooijman, S. A. L. M.Geophys.Res.Let. 2006
http://www.phys.uu.nl/%7Edijkstra/pubs2006.html
Genetic variation in the zebrafish
Guryev, V.Koudijs, M. J.Berezikov, E.Johnson, S. L.Plasterk, R. H.van Eeden, F. J.Cup...Genome Res 2006, 16(4): 491
Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
Berezikov, E.van Tetering, G.Verheul, M.van de Belt, J.van Laake, L.Vos, J.Verloop, R...Genome Res 2006, 16(10): 1289
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Detecting Transcriptionally Active Regions Using Genome Tiling Arrays
Halasz, G.Van Batenburg, M. F.Perusse, J.Hua, S.White, K. P.Bussemaker, H. J.Genome Biology 2006, 7(7)
Benchmarking ortholog identification methods using functional genomics data
Hulsen, T.Huynen, M. A.de Vlieg, J.Groenen, P. M.Genome Biol 2006, 7
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Optimal design and analysis of genetic studies on gene expression
Fu, J.Jansen, R. C.Genetics 2006, 172(3): 1993
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Simultaneous estimation of gene-gene and gene-environment interactions for numerous loci using double penalized log-likelihood
Tanck, M. W.Jukema, J. W.Zwinderman, A. H.Genet Epidemiol 2006, 30(8): 645
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Red queen dynamics in a predator-prey ecosystem
Wiering, M. A.de Jong, E. D.de Back, W.GECCO '06 2006
http://igitur-archive.library.uu.nl/vet/2007-0302-210407/wiering_06_re...
The parellel nash memory for asymmetric games
Oliehoek, F. A.Vlassis, N.de Jong, E. D.GECCO '06 2006
http://people.cs.uu.nl/dejong/publications/parnashgecco06.pdf
DECA: Dimension extracting coevolutionary algrorithm
de Jong, E. D.Bucci, A.GECCO '06 2006
http://people.cs.uu.nl/dejong/publications/deca.pdf
Combining gradient techniques for numerical multi-objective evolutionary optimization
de Jong, E. D.Bosman, P. A. N.GECCO '06 2006
http://people.cs.uu.nl/dejong/index.html#publications
Sub-type Specific Sites for SMAD Receptor Binding Identified by Sequence Comparison using "Sequence Harmony"
Feenstra, K. A.Pirovano, W.Heringa, J.From Computational Biophysics to Systems Biology 2006, 34: 73
Common pathological mechanisms in mouse models for muscular dystrophies
Turk, R.Sterrenburg, E.van der Wees, C. G.de Meijer, E. J.de Menezes, R. X.Groh, S.Ca...FASEB J 2006, 20(1): 127
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Embryonic stem cell proteomics
van Hoof, D.Mummery, C. L.Heck, A. J.Krijgsveld, J.Expert Rev Proteomics 2006
SMs-emoa: Multiobjective selection based on dominated hypervolume
Emmerich, M. T. M.European J of Operation Research 2006
A text-mining analysis of the human phenome
van Driel, M. A.Bruggeman, J.Vriend, G.Brunner, H. G.Leunissen, J. A.Eur J Hum Genet 2006, 14(5): 535
Novel early target genes of parathyroid hormone-related peptide in chondrocytes
Hoogendam, J.Parlevliet, E.Miclea, R.Lowik, C. W.Wit, J. M.Karperien, M.Endocrinology 2006, 147(6): 3141
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
A second, non-canonical RNA-dependent RNA polymerase in SARS coronavirus
Imbert, I.Guillemot, J. C.Bourhis, J. M.Bussetta, C.Coutard, B.Egloff, M. P.Ferron, F...Embo J 2006, 25(20): 4933
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Frequent Subgraph Miners: Runtimes Don't Say Everything, Mining and Learning with Graphs (MLG 2006)
Nijssen, S.Kok, J. N. Series, EditorECML/PKDD 2006 2006
The promise of a virtual lab in drug discovery
Rauwerda, H.Roos, M.Hertzberger, B. O.Breit, T. M.Drug Discov Today 2006, 11(5): 228
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Object presentation, sample size, and data set complexity
Duin, R. P.Pekalska, E. M.Basu, M.Ho, T. K.Data Complexity in Pattern Recognition 2006: 25
Natural diversity and adaptive responses of Lactococcus lactis
Hylckama Vlieg, J. E.Rademaker, J. L.Bachmann, H.Molenaar, D.Kelly, W. J.Siezen, R. J...Curr Opin Biotechnol 2006, 17(2): 183
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Mitochondria, hydrogenosomes and mitosomes: products of evolutionary tinkering!
Hackstein, J. H.Tjaden, J.Huynen, M.Curr Genet 2006, 50(4): 225
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...
Bagged K-means clustering improves accuracy when clustering metabolic data
Hageman, J. A.van den Berg, R. A.Westerhuis, J. A.Hoefsloot, H. C. J.Smilde, A. K.Crit Rev in Anal Chem 2006, 36: 21
Tribler: A social-based Peer-to-Peer system
Pouwelse, J.Garbacki, P.Wang, J.Bakker, A.Yang, J.Losup, A.Epema, D.Reinders, M. J. T...Concurrency and computation: practice and experience 2006, 20(2): 127
Problem-solving environments for biological morphogenesis
Sloot, P. M. A.Kaandorp, J. A.Merks, R. M. H.Hogeweg, P.Hoekstra, A. G.Computer Science English 2006
Learning the Comlete-Basis-Functions Parameterization for the Optimization of Dynamic Molecular Alignment by ES. IDEAL 2006
Shir, O. M.Kok, J. N.Back, T.Vrakking, M. J. J.Computer Science 2006, 4224: 410
An even faster algorithm for ridge regression of reduced rank data
Turlach, B.Computational Statistics & Data Analysis 2006, 50(3): 642
http://apps.isiknowledge.com//InboundService.do?SID=W1hgMN9FP@9AppAFiO...
Fast and compact smoothing on large multidimensional grids
Eilers, Paul H. C.Currie, Iain D.Durbán, MariaComputational Statistics & Data Analysis 2006, 50(1): 61
http://www.sciencedirect.com/science/article/B6V8V-4D4MDK9-2/2/c9a3341...
Generalized structured additive regression based on Bayesian P-splines
Brezger, A.Lang, S.Computational Statistics & Data Analysis 2006, 50(4): 967
http://apps.isiknowledge.com//InboundService.do?SID=W1hgMN9FP@9AppAFiO...
Genetic algorithms for the selection of smoothing parameters in additive models
Krause, RüdigerTutz, GerhardComputational Statistics 2006, 21(1): 9
http://apps.isiknowledge.com//InboundService.do?SID=W1hgMN9FP@9AppAFiO...
Bayesian sigmoid shrinkage with improper variance priors and an application to wavelet denoising
ter Braak, C. J. F.Comp Stat and Data Analysis 2006, 51: 1232
Improving Automatic Data Structure Generation for e-Science Applications
Guevara, V.Yakali, H.Belloum, A. S. Z.de Laat, C.CollaborateCom 2006
Potential confounding in evaluating infection-control interventions in hospital settings: changing antibiotic prescription
Nijssen, S.Bootsma, M.Bonten, M.Clin.Infect.Dis. 2006, 43(5): 616
http://www.ncbi.nlm.nih.gov/pubmed/16886156
Common variants of multiple genes that control reverse cholesterol transport together explain only a minor part of the variation of HDL cholesterol levels
Boekholdt, S. M.Souverein, O. W.Tanck, M. W.Hovingh, G. K.Kuivenhoven, J. A.Peters, R...Clin.Genet. 2006, 69(3): 263
Common sodium channel promoter haplotype in asian subjects underlies variability in cardiac conduction
Bezzina, C. R.Shimizu, W.Yang, P.Koopmann, T. T.Tanck, M. W.Miyamoto, Y.Kamakura, S.R...Circulation 2006, 113(3): 338
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&d...