Programme NBIC Conference 2008
Programme: 5 March 2008
| 09:30 - 10:00 | Opening by Prof. dr. Antoine van Kampen (Scientific director NBIC) |
| BioRange Consortium Meeting 2008 | |
| 10:00 - 10:50 | Keynote speaker: Prof. dr. Carole Goble |
| Information Management Group, University of Manchester, UK | |
| Title: ' The Seven Deadly Sins of Bioinformatics' | |
| Research group - myGrid | |
| 11:20 - 12:40 | Theme: Gene expression, chair: Perry Moerland |
| Martin van Vliet, Delft University of Technology / Netherlands Cancer Institute | |
| Pooling breast cancer datasets has a synergetic effect on..... | |
| Marcel van Batenburg, Academic Medical Center Amsterdam | |
| Tissue-preferential ridges | |
| Philip Kensche, CMBI, University Medical Centre St. Radboud Nijmegen | |
| Conservation of gene orientation in fungi | |
| Yanju Zhang, LIACS, Leiden University | |
| Screen of MicroRNA Targets in Zebrafish Using Heterogeneous Data... | |
| 14:00 - 15:00 | Theme: Genomics, chair: Jacques Leunissen |
| Victor Guryev, Hubrecht Institute | |
| Copy-number variation in genomes of laboratory rat strains... | |
| Fabrice Colas, LIACS, Leiden University | |
| A KDD Scenario for Complex Osteo Arthritis Subtypes | |
| Identification from Severity Scores | |
| Martin Oti, CMBI, University Medical Centre St. Radboud, Nijmegen | |
| Clustering the OMIM and POSSUM disease phenotype data | |
| 15:00 - 15:40 | Theme: BioAssist |
| Miaomiao Zhou, CMBI, University Medical Centre St. Radboud, Nijmegen | |
| LocateP: Genome-scale subcellular-location predictor for bacterial.. | |
| Margriet Hendriks, University Medical Centre Utrecht | |
| Netherlands Metabolomics Centre data processing support platform | |
| 16:10 - 18:00 | 3 parallel workshops: |
| - Workshop 1: Workflow management: Taverna | |
| - Workshop 2: Valorisation: usability and exploitation | |
| - Workshop 3: Speed Reading |
Programme: 6 March 2008
| 09:00 - 09:50 | Keynote speaker: Dr. Christian Conrad |
| EMBL, Heidelberg | |
| Title: 'Automatic screening in genome wide RNAi live cell-based assays' | |
| Abstract - Research | |
| 09:50 - 10:30 | Theme: Computational Biology, chair: Gert Vriend |
| Sander Nabuurs, CMBI, Radboud UMC, Nijmegen/ | |
| It's good to be flexible - considering protein flexibility in structure based | |
| drug design | |
| Daan van Schalkwijk, TNO Quality of Life / LACDR | |
| Particle Profiler: Development of a Population Dynamics... | |
| 11:00 - 12:20 | Theme: Metabolic Networks, chair: Hans van Beek |
| Harmen Draisma, LACDR, Leiden University | |
| Similarities and differences in lipidomics profiles among... | |
| Yunlei Li, Delft University of Technology | |
| Metabolic pathway alignment between species using a | |
| comprehensive, flexible similarity measure | |
| Thomas Binsl, IBIVU, VU University Amsterdam | |
| FluxEs: A Framework for Metabolic Flux Estimation | |
| Richard Notebaart, CMBI, Radboud UMC, Nijmegen | |
| Co-regulation of metabolic genes is better explained by... | |
| 13:50 - 14:50 | Theme: Protein Networks, chair: Marcel Reinders |
| Jos Boekhorst, Utrecht University | |
| Overlap between phosphoproteomics datasets of eukaryotic... | |
| Patrick Kemmeren, Genomics Lab, University Medical Centre Utrecht | |
| An Accurate Physical Interactome Map of Saccharomyces cerevisiae | |
| Herman van Haagen, Leiden Univesity Medical Centre | |
| Prediction of protein-protein interactions based on literature... | |
| 15:20 - 16:10 | Keynote speaker: Dr. Piero Carninci |
| RIKEN, Genome Science Laboratory, Japan | |
| Title: ' Transcriptome complexity analyzed by high-throughput | |
| sequencing analysis ' | |
| Abstract - Research |